Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791187.1_cds_XP_016505889.1_1840
CDS Infomation

[gene=LOC107823700] [db_xref=GeneID:107823700] [protein=probable methyltransferase PMT2] [protein_id=XP_016505889.1] [location=join(3586..4236,4543..4753,5346..5634,6234..6623,7680..7757,8243..8477)] [gbkey=CDS]
Sequence

ATGGCAACAAAAGGAAATCCAGGGGATAACAGAAGTAGAAGCCCTTTATCATCATTATTT
ATTGTAGCTGGACTTTGTTGTTTTTTCTATCTTCTAGGAGTGTGGCAAAGAAGCGGTTTC
GGGAAGGGAGATAGCATAGCTCTTGAGATAACAAAGAAGGCAGAGGACTGCGGCATCCTC
CCCAATTTGGAGTATGAAACACATCATGGGAATCAAAGCAGCTCATTCGATGATCCTAAC
CAAGAAATCAAGCAGATTGAGCCATGTGCTGAGCAATATGTTGATTACACACCATGTCAC
GATCAAATGCGAGCAATGACATTTCCTCGAGAAAATATGAACTATAGGGAGAGACACTGT
CCTCCGGAGGAAGAGAAACTGCATTGTCTCATTCCAGCCCCAAAAGGATATGTGACTCCT
TTTCAGTGGCCAAAGAGTCGTGACTATGTACCTTTTGCAAATGCACCATATAAAAGCTTA
ACAGTTGAGAAAGCAGTGCAAAATTGGGTCCAATATGAAGGCAATGTATTTAGATTTCCA
GGTGGTGGTACACAGTTCCCTAATGGAGCAGATGCATATATTGATCAACTTGCTTCTGTG
ATCCCAATAGACAATGGTACAGTACGAACTGCATTGGATACCGGATGTGGGGTTGCAAGT
TGGGGTGCATACCTTTTCAAGAAGAATGTTCTAACCATGTCGTTCGCACCAAGAGACTCA
CATGAATCTCAAGTTCAATTTGCTTTGGAAAGAGGTGTTCCAGCAGTTATTGGTGTGCTT
GGAACCATAAAATTGCCATATCCATCTAGAGCTTTTGATATGGCTCACTGCTCACGTTGT
TTGATTCCGTGGGGTGCAAATGATGGACAGTACATGATGGAAGTCGACCGAGTGCTCAGA
CCAGGGGGCTACTGGGTACTTTCAGGTCCTCCAATTAACTGGCGGAATAATTATCAAGCG
TGGCAGCGTCCCAAAGAGGAGTTGGAGGAGGAACAGAGAAAGATTGAAGAAATAGCTGAA
CTTCTCTGCTGGGAAAAGAAGCATGAGAAAGGTGAGATTGCCATATGGAGAAAAAGAGTA
AACAATGAGTACTGCAGGGAACGTGATTCTCGTGTAACTCTATGTGAATCCTCGAATGCA
GAAAATGTCTGGTATAAGAAGATGGAGGCATGTGTAACTCCTTATCCTCAGACAACTAAT
TCAGACGAAGTTGCTGGTGGGGAACTTAAGCCGTTCCCACAGAGACTTAATACTGTTCCT
CCGAGAATAGCAAGTGGATCTGTCCCTGGATTATCTGTTGAGTCATTCCAGGAGGACAAC
AAGTTATGGAAAAAGCATGTGAATTCTTATAAGAGAGTTAATAAAATCCTCGACAGTGGG
AGGTATCGAAATATACTGGATATGAATGCTGGCCTAGGAAGTTTTGCTGCAGCACTTGAA
TCACCCAAGTTATGGGTCATGAATGTTGTTCCAAATATAGCTGAACAAGACACTCTTGGA
GTTATATATGAACAAGGCTTGATTGGAATATATCATGATTGGTGTGAAGCCTTCTCTACA
TATCCTCGGACATATGACCTTATTCATGCAAATGGAGTTTTCAGCTTATACAAGGACAAA
TGTAATGCTGAAGACATTTTACTAGAGATGGATAGGATTCTTAGACCAGAAGGTGCAGTC
ATATTGCGAGACCATGTAGATGTCCTCACTCAAGTGAAAAGAATTGCGTCCGGTATGAGG
TGGAACATAAAAATGGTGGATCACGAGGATGGTCCTCTGATCCCTGAAAAGGTGCTATTT
GGTGTTAAAAAATACTGGGTTGCAGGGGATAACAACTCAACTGTCTCAGAGTGA

Peptide Sequence

PEP ID

XP_016505889.1
PEP Infomation

PREDICTED: probable methyltransferase PMT2 [Nicotiana tabacum]
Sequence

MATKGNPGDNRSRSPLSSLFIVAGLCCFFYLLGVWQRSGFGKGDSIALEITKKAEDCGIL
PNLEYETHHGNQSSSFDDPNQEIKQIEPCAEQYVDYTPCHDQMRAMTFPRENMNYRERHC
PPEEEKLHCLIPAPKGYVTPFQWPKSRDYVPFANAPYKSLTVEKAVQNWVQYEGNVFRFP
GGGTQFPNGADAYIDQLASVIPIDNGTVRTALDTGCGVASWGAYLFKKNVLTMSFAPRDS
HESQVQFALERGVPAVIGVLGTIKLPYPSRAFDMAHCSRCLIPWGANDGQYMMEVDRVLR
PGGYWVLSGPPINWRNNYQAWQRPKEELEEEQRKIEEIAELLCWEKKHEKGEIAIWRKRV
NNEYCRERDSRVTLCESSNAENVWYKKMEACVTPYPQTTNSDEVAGGELKPFPQRLNTVP
PRIASGSVPGLSVESFQEDNKLWKKHVNSYKRVNKILDSGRYRNILDMNAGLGSFAAALE
SPKLWVMNVVPNIAEQDTLGVIYEQGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKDK
CNAEDILLEMDRILRPEGAVILRDHVDVLTQVKRIASGMRWNIKMVDHEDGPLIPEKVLF
GVKKYWVAGDNNSTVSE

Transcript Sequence

Gene sequence data has not been registered.